miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|48454402|gb|CN972811.1|CN972811 ANGGGAATCGGCACGAGGTANACCGAGACATTAATTAAAAATGTTCTGCTGGACAAACAGAATCGAGCAAAGATCACTGA
TCTGGGCTTTTGCAAACCTGAGGCCATGATGTCTGGCAGCATTGTTGGGACTCCCATCCATATGGCTCCAGAGCTGTTTA
CAGGAAAGTATGATAACTCGGTCGACGTGTACGCCTTCGGGATCCTGTTCTGGTATCTCTGCACCGGTTCAGTGAAGCTT
CCAGACGCCTTTGAGAAATGCTCCAGCAAGGACCAGCTGTGGAACAACGTCAAAAAGGTTCCAGGCCGGAGCGTCTGCCA
CTTTCGACGAGAATGCTGGCAGCTGATGGAGGCCTGCTGGAACGGGGACCCTTCGCTCAGACCCCTGCTCGGCATCGTGG
AGCCCAGCCTGCAGAGCATCATGCACCGGCTCTGCGACTGCAGCTCCGAGCAGAAAAGCAGCAGCCTTGAGGACTCAAAC
TGATAACACTCCAAACAAACTAACAGAAAAACCTGTTTTTTTGTTCTTTGTTTTTTCCTTTTGTGTGTATTTATGAAGAG
CGGAGGAAGCGGACGACAACAGGTGACCAATGAAAAGGCTGTCCGTGCTTTGTTTAACCCGGTGGTGGGATGTTGGTTAT
TTATGAGGGAGACTGATAGAAAAACCAAGAGTGTTCCACTGTTTTTATTGTGCATGGTTGTGTNTTTGTTTAACAATCCA
ATATGTTTTCTCCAATGTAATTCAGGGGTAAATGGTAATTCAATAAANGTTNTATCATTNGTTTTAACAGTTNTTTNTCG
GTTTAAAAACACGTGTGTGACAANTATNTTAG




Most similar to sp|Q4VSN2|DUSTY_TAKRU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4VSN2|DUSTY_TAKRU Dual serine/threonine and tyrosine protein
            kinase OS=Takifugu rubripes GN=dstyk PE=2 SV=1
          Length = 921

 Score =  243 bits (619), Expect = 2e-63
 Identities = 119/134 (88%), Positives = 122/134 (91%), Gaps = 2/134 (1%)
 Frame = +1

Query: 34   IKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFW 213
            +KNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFW
Sbjct: 773  LKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFW 832

Query: 214  YLCTGSVKLPDAFEKCSSKDQLWNNVKK--VPGRSVCHFRRECWQLMEACWNGDPSLRPL 387
            YLC GSVKLP+AFEKCSSKDQLWNNVKK   P R  C F  ECWQLMEACWNGDPS RPL
Sbjct: 833  YLCAGSVKLPEAFEKCSSKDQLWNNVKKGARPERLPC-FDEECWQLMEACWNGDPSQRPL 891

Query: 388  LGIVEPSLQSIMHR 429
            LGIVEPSLQS+M R
Sbjct: 892  LGIVEPSLQSMMVR 905